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config.cym simulation
nbiter      100    
dt          0.01      
record      50       
boxsize     10        10
cxmax       1
cxdiff      20

click to animate !
download config.cym

Above left is a minimal parameter file. In this case, the simulation contains only one object, a motor complex. The outcome of the simulation can be seen by clicking on the picture on the right. The complex is freely diffusion inside a empty box.

The parameter file defines what is necessary to run this simulation:
In the next examples, we will see each of these parameters in more detail.

You can run a similar simulation simply by dowloading the file config.cym on your own computer, by clicking on the link below the animation. (see here for instructions on installing and running the program).